We’re excited to introduce the GIDEON R Bundle, launched as a beta take a look at for our customers worldwide. GIDEON R is an environment friendly plug-and-play statistical device for cleansing, analyzing, and visualizing epidemiological knowledge and epidemiologic analysis from the GIDEON database. There is no such thing as a have to program your personal REST API queries. Our public well being experience is not like some other public well being utility and our epidemiological knowledge evaluation is second to none.
EXCLUSIVE SNEAK PEEK FOR EXISTING GIDEON CUSTOMERS
- All present GIDEON prospects get early entry to expertise and take a look at the GIDEON R Beta bundle. Click on right here to obtain the bundle.
- Tell us what you assume!
- Your feedback assist us refine and launch the perfect model of GIDEON R on your analysis wants.
Picture: GIDEON R bundle in use
Over 189 scientific research that leveraged GIDEON’s software program had been printed in simply the previous three years. This quantity is quickly rising as many investigators flip to the intensive infectious illness library for epidemiological insights and cross-discipline research.
The GIDEON database is a priceless web-based reference of infectious illnesses and their world occurrences because the 1900s. As of 2020, researchers additionally get to customise and construct their statistical instruments to investigate knowledge utilizing the GIDEON API or Software Programming Interface (API).
Whereas GIDEON’s large world database of infectious illnesses and the GIDEON API are potent instruments with a wide range of capabilities, GIDEON R permits you to increase your analytics to the following degree.
Why Use GIDEON R For Knowledge Evaluation?
R, the free, open-source programming language for statistical evaluation software program, has remodeled how investigators prep, clear, and wrangle massive databases to get good data. With minimal coding required, you may clear and arrange quicker and conduct reproducible steps throughout statistical evaluation.
R is rapidly gaining in recognition with researchers. R programming is part of the usual analytics curriculum in universities like Harvard and the Imperial Faculty in London. It’s quick changing into a mainstay in Public Well being and epidemiological analysis research and experiences. Within the UK, the O Well being basis, an impartial charity, developed an NHS-R neighborhood to assist leverage the ability of R for the NHS (Nationwide Well being System). Groups of specialists skilled NHS analysts to make use of and embed R into the NHS to assist enhance the supply of care.
Utilizing the GIDEON R bundle brings you extra effectivity to:
- Examine 25,000+ ongoing and historic infectious illness outbreaks,
- Produce granular outbreak maps for chosen illnesses in a given 12 months vary
- Examine the emergence of zoonotic illnesses in a selected nation,
- Consider epidemiological conditions across the globe,
- Retrieve a wealth of knowledge on 360+ infectious illnesses, 2,000+ pathogens, and 30,000+ commerce names of medicine and vaccines.
The GIDEON R bundle brings all of the comfort and effectivity of the free, open-source programming language R to the world of epidemiology.
Advantages of utilizing GIDEON R embody…
There is no such thing as a have to discover ways to work with a REST API consumer to parse the GIDEON database. With GIDEON R, you may hit the bottom working and begin crunching your knowledge.
Working with a GIDEON REST API presents you better and full management over how your program manipulates knowledge. Nevertheless, it requires customers to own programming expertise and can also imply an funding in rigorous guide and computerized testing to make sure it capabilities effectively underneath stress. Your crew might want to spend appreciable time testing, sequencing API calls accurately, validating parameters, and fixing some other points earlier than starting the evaluation. GIDEON R offers researchers aware of R the flexibility to skip this a part of the method and get straight to the analytics.
GIDEON R permits you to create scripts on your total evaluation course of and run a simulation. This manner, even for those who make a gentle edit to the info, the entire course of might be run once more with the reassurance of reproducibility. As an investigator, you may then deal with growing and analyzing completely different runs with out worrying in regards to the analytical or statistical technique altering.
Epidemiology analysis is advanced and difficult. No two research will ever be exactly the identical. R presents a substantial toolkit of statistical modeling instruments that epidemiologists require, together with logistic and Poisson regression and Cox proportional hazard fashions.
With R, stats come to life. Utilizing R for visualization is just like the well-known scene within the basic film ‘The Wizard of Oz’ when Dorothy steps out of her boring black and white home and into the dazzling technicolor land of Oz.
R can create any kind of graph or charts – quick ones for evaluation and even publication-ready charts with minimal code. R presents in-built capabilities and libraries to generate fundamental maps like bar charts, histograms, and scatter plots. It could actually additionally create superior visualization instruments like warmth and mosaic maps, 3D graphs, or correlograms in vivid technicolor on your exploratory knowledge evaluation, shows, and publications.
R runs on the whole lot. R’s code is platform-independent – which suggests it doesn’t matter for those who use Home windows, Mac, or some other system. So, with GIDEON R, you may make sure that your program is appropriate with any kind of platform you or your crew use. This can be a important profit when working with groups situated in numerous areas and throughout the globe.
GIDEON R optimizes how investigators use the GIDEON API to mine the GIDEON infectious illness database.
GIDEON API
The GIDEON API permits medical professionals and researchers pressed for time and assets entry to world knowledge on tons of of illnesses, medication, and micro organism – since 1348 AD.
With the GIDEON API, you get a direct feed of infectious illness knowledge from all over the world at your fingertips. The GIDEON API relies on RESTful rules, and knowledge is refreshed and up to date every single day, typically even a number of instances a day.
The perfect half? All institutional subscribers to GIDEON get entry to the GIDEON API freed from cost.
Revealed Articles that Used GIDEON Software program for Epidemiology
In keeping with Professor Rodolphe Desbordes, Professor of Economics at SKEMA Enterprise Faculty, France, and extensively printed in Worldwide Economics and Financial Improvement:
“GIDEON was the right database for the epidemiological undertaking I had in thoughts <…> the knowledge offered on every illness was essential to a greater understanding of disease-specific traits.“
GIDEON has a wealthy historical past of partnering with researchers and scientists worldwide by providing all kinds of assets on infectious illnesses. You could find knowledge going again to 1348 AD, observe outbreaks on an interactive map, determine over 2000+ pathogens, diagnose and examine any variety of infectious illnesses, medication, and microbes.
The GIDEON database incorporates 23,600 country-specific notes with 3+ million phrases of textual content that define the standing of particular infections inside every nation. Additionally featured are over 250,000 linked references, 3,000 photographs, 34,000 graphs, and quite a few interactive maps.
There are greater than 189 research printed in simply the previous three years that use GIDEON’s database to generate significant insights. Listed below are just a few of the current articles printed that used GIDEON for his or her analysis:
- June 2021, Foodborne Parasitic Illnesses: F. Chavez-Ruvalcaba et al. printed their evaluation of foodborne parasitic illnesses within the neotropics. Since greater than one-fifth of the world’s inhabitants is contaminated by a number of intestinal parasites, the authors evaluation the most typical ones affecting international locations in Central and South America [2].
- June 2021, Lyme Borreliosis in Poland: Brzozowska et al. printed their examine in regards to the tick-borne Lyme Borreliosis in Poland. They discovered the incidence to be equally important in city and rural communities and harassed the significance of widespread consciousness and schooling. The examine used GIDEON-generated knowledge to match Lyme Borreliosis prevalence throughout the globe [3].
- Might 2021, Management of Intestinal Nematodes in African Inexperienced Monkeys (AGMs): A veterinary examine by Katalina Cruz et al. tackled the efficacy of antiparasitic remedy and husbandry strategies to manage nematode infections in AGMs. The authors referred to insights from the GIDEON database to spotlight that as a result of AGMs usually are available contact with people on the island, they might play a task within the zoonotic parasitic infections generally discovered on St. Kitts [4].
- Might 2021, Rising Antibiotic-Resistant Pathogens in Iran: As a part of their examine, Rahder et al. analyzed the reported prevalence of actinomycetes infections worldwide utilizing printed world prevalence knowledge sourced from the GIDEON database. They determine infections in Iran affecting immunocompromised and different weak sufferers and suggest steady monitoring to raised forestall an infection and enhance therapeutic strategies to deal with the infections [5].
- March 2021, Brucellosis: Battikh et al. from Tunisia used the GIDEON database to investigate the rise in Brucellosis instances of their hospital. They discovered that osteoarticular involvement was the most typical complication of brucellosis of their affected person pool. The researchers advisable higher animal management practices by way of vaccinations, occupational and private hygiene, farm sanitation, and extra to decrease the variety of instances [6].
- March 2021, International Empirical Evaluation of Spatial Dynamics of Main Illness Outbreaks: Professor Rodolphe Desbordes offered the Spatio-temporal dependence and mortality penalties of the highest 15 illness outbreaks in developed or growing international locations over ten years. Within the article, he states that his crew primarily relied on the “under-exploited GIDEON database that gives a worldwide protection of all infectious illnesses [7].”
In an interview, Professor Desbordes talked about why accessing knowledge added to his examine. He talked about, “As an utilized economist, I worth glorious knowledge on a novel and attention-grabbing subject greater than the rest. The GIDEON database allowed me to publish in a superb journal and, most significantly, rigorously mannequin the spatial diffusion of infectious illnesses in a globalized world.”
- March 2021, Ecological Circumstances That Improve Vector-Borne and Zoonotic Illnesses Outbreaks: Morand and Lajaunie printed their findings on how world forest cowl modifications and oil palm expansions are related to elevated outbreaks of vector-borne and zoonotic illness outbreaks from 1990 to 2016. The authors state, “Right here, we look at the worldwide developments between modifications in forest cowl in current a long time and epidemics of human infectious illnesses, utilizing the GIDEON world database, which is the perfect out there dataset on infectious illnesses that has already been utilized in a number of research [8].”
Need to be an early consumer and take a look at GIDEON R?
- All present GIDEON prospects get free entry to expertise and take a look at the GIDEON R Beta bundle. Click on right here to start out.
- Tell us what you assume!
- Not an present GIDEON buyer? Don’t fear. We’ve received you coated. Join a free demo to get began.
Conclusion
GIDEON is among the most well-known and complete world public well being databases for infectious illnesses. Knowledge is refreshed every day, and the GIDEON API permits medical professionals and researchers entry to a steady stream of knowledge.
The GIDEON R bundle permits researchers to retrieve, clear, analyze, and visualize infectious illness knowledge in real-time from the GIDEON database with out the necessity to get aware of API shoppers and study to program their very own API queries. This improves the effectivity and reproducibility of analysis strategies and outcomes and lowers the time and prices required to discover ways to work with REST APIs.
The GIDEON Distinction
GIDEON is among the most well-known and complete world databases for infectious illnesses. Knowledge is refreshed every day, and the GIDEON API permits medical professionals and researchers entry to a steady stream of knowledge. Whether or not your analysis includes quantifying knowledge, studying about particular microbes, or testing out differential prognosis instruments– GIDEON has you coated with a program that has met requirements for accessibility excellence.
It’s also possible to evaluation our eBooks on Mycetoma, Relapsing fever, Sarcocystosis, and extra. Or take a look at our world standing updates on international locations like Sao Tome and Principe, Cayman Islands, Falkland Islands, and extra!
References
| [1] | A. A.-S. e. al., “Worldwide dynamic biogeography of zoonotic and anthroponotic dengue,” PLoS Negl. Trop. Dis., vol. 15, no. 6, p. e0009496, 2021. |
| [2] | F. Chávez-Ruvalcaba, M. I. Chávez-Ruvalcaba, M. Okay. Santibañez, J. L. Muñoz-Carrillo, C. A. León and R. R. Martínez, “Foodborne Parasitic Illnesses within the Neotropics – a evaluation,” Helminthologia, vol. 58, no. 2, pp. 119-133, 2021. |
| [3] | M. Brzozowska, A. Wierzba, A. Śliwczyński, M. Myśliwiec, Okay. Kozłowski and W. Wierzba, “The issue of Lyme borreliosis infections in city and rural residents in Poland, based mostly on Nationwide Well being Fund knowledge,” Annals of Agricultural and Environmental Medication, vol. 28, no. 2, p. 277–282, 2021. |
| [4] | Okay. Cruz, T. M. Corey, M. Vandenplas, M. Trelis, A. Osuna and P. J. Kelly, “Case report: Management of intestinal nematodes in captiveChlorocebus sabaeus,” Onderstepoort Journal of Veterinary Analysis, vol. 88, no. 1, pp. 2219-0635, 2021. |
| [5] | H. A. Rahdar, S. Mahmoudi, A. Bahador, F. Ghiasvand, H. Sadeghpour and M. M. Feizabadi, “Molecular identification and antibiotic resistance sample of actinomycetes isolates amongst immunocompromised sufferers in Iran, rising of latest infections,” Scientific Stories, vol. 11, 2021. |
| [6] | H. Battikh, A. Berriche, R. Zayoud, L. Ammari, R. Abdelmalek, B. Kilani, H. Tiouiri Ben Aissa and M. Zribi, “Medical and laboratory options of brucellosis in a college hospital in Tunisia,” Infectious Illnesses Now, 2021. |
| [7] | R. Desbordes, “Spatial dynamics of main infectious illnesses outbreaks: A worldwide empirical evaluation,” Journal of Mathematical Economics, vol. 93, 2021. |
| [8] | S. Morand and C. Lajaunie, “Outbreaks of Vector-Borne and Zoonotic Illnesses Are Related With Modifications in Forest Cowl and Oil Palm Enlargement at International Scale,” Entrance. Vet. Sci., vol. 8, p. 230, 2021. |
| [9] | R. e. al., “Knowledge proliferation, reconciliation, and synthesis in viral ecology,” bioRxiv, 2021. |
